PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0010s0067.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HSF
Protein Properties Length: 198aa    MW: 22443.6 Da    PI: 9.3614
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0010s0067.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind105.73.7e-33161142102
                          HHHHHHHHHCTG.......GGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEES CS
         HSF_DNA-bind   2 Flkklyeilede.......elkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhk 84 
                          Fl+k+y++le++       + k+++sw++ng+ fvv+ ++efa+ +LpkyFkh+nf+SF+RQLn+YgFkk+++++         weF+h+
  Kaladp0010s0067.1.p  16 FLSKTYDLLEEAgdagegrNGKKIVSWNANGDGFVVWCTSEFADILLPKYFKHNNFSSFIRQLNTYGFKKTTSKR---------WEFQHE 96 
                          9*********666666666999*************************************************9998.........****** PP

                          XXXXXXXXXXXXXXXXXX CS
         HSF_DNA-bind  85 sFkkgkkellekikrkks 102
                          +F+kg+++ll +i rk+ 
  Kaladp0010s0067.1.p  97 KFRKGQRHLLAEISRKRC 114
                          ***************975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.107.5E-3411106IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004151.1E-4212112IPR000232Heat shock factor (HSF)-type, DNA-binding
SuperFamilySSF467854.62E-2713112IPR011991Winged helix-turn-helix DNA-binding domain
PfamPF004479.7E-3016112IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000565.5E-122346IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000565.5E-126173IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000565.5E-127486IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence